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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27814296_27815428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27814296 - 27815428

Intron Length:

1133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCATC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

ACACCAGTCACG

Flanking Amino Acid:

FNLIKHYCNQLSNKLNSLST

Intron Amino Acid Position:

512

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

77.9

36.9

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

87.5

0.84

0.7

81.2

36.5

Minor 5ss

50.2

0.01

2.5

68.8

42.2

Minor BPS

37.4

-1.1

2.4

41.17

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023740

27800660 - 27817917

17258

ENSAPLT00000013317

27797609 - 27844887

47279