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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27817914_27818785_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

27817914 - 27818785

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

CAGGATTAGCAAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATTAACA

Flanking Amino Acid:

LSAALDADSEGYKKKAVSAI

Intron Amino Acid Position:

610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

85.3

32.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

-0.2

1.2

37.8

43.3

Minor 5ss

39.9

-1.1

2.8

46.6

41.8

Minor BPS

73.5

0.73

1.7

84.69

35.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013317

27797609 - 27844887

47279