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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27826358_27827584_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27826358 - 27827584

Intron Length:

1227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAAAC

5'SS Class:

major

3'SS Sequence:

CCTCCATGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TTCTCCTCCATG

Flanking Amino Acid:

ILDMQENIIQASFAAECRDN

Intron Amino Acid Position:

881

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

71.2

34.5

Major BPS

73.1

0.57

71.9

31.3

Major PPT

66.8

0.38

0.9

61.5

33.8

Minor 5ss

26.9

-2.6

33.2

42.3

Minor BPS

51.5

-0.1

2.1

63.16

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013317

27797609 - 27844887

47279