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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27839165_27839741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27839165 - 27839741

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

TCTGGAATAATT

Flanking Amino Acid:

KLPEISHRLEGFYGQCFGED

Intron Amino Acid Position:

1265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

43.9

-0.3

2.2

65.51

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013317

27797609 - 27844887

47279