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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27841129_27841780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27841129 - 27841780

Intron Length:

652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTGGG

5'SS Class:

strong_major

3'SS Sequence:

CCATTTCCACTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

TATGGTTCAAAT

Flanking Amino Acid:

TRINIIQKEEFILTPIEVAI

Intron Amino Acid Position:

1374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

42.1

Major BPS

77.3

0.68

81.5

Major PPT

65.9

0.36

0.9

59.6

36.6

Minor 5ss

32.2

-2

3.1

41.1

45.2

Minor BPS

-0.2

2.1

66.41

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013317

27797609 - 27844887

47279