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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27856_28077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27856 - 28077

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGACA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCACAA

U12 Branch Point Sequence:

CCTTCCCCACCA

Flanking Amino Acid:

KVQKEPKQPNRLPSGWLSLD

Intron Amino Acid Position:

1389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.3

Major BPS

48.8

-0

54.9

31.1

Major PPT

0.79

0.7

79.9

25.5

Minor 5ss

31.2

-2.2

3.3

40.2

45.7

Minor BPS

-0.3

2.1

59.96

45.8

Associated Gene:

Gene:

RUSC2

Ensembl Gene ID:

ENSAPLG00000023823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038355

26121 - 58339

32219

ENSAPLT00000007727

26121 - 58339

32219

ENSAPLT00000001571

26121 - 58339

32219