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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_27881014_27891248_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

27881014 - 27891248

Intron Length:

10235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

TCTCTTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TAATTTTCATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

77.4

33.6

Major BPS

100

1.24

0.5

100

Major PPT

84.8

0.78

0.7

80.8

24.3

Minor 5ss

46.7

-0.3

2.8

68.1

42.7

Minor BPS

48.4

-0

1.7

65.58

39.5

Associated Gene:

Gene:

KANK1

Ensembl Gene ID:

ENSAPLG00000020411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036313

27880770 - 27984683

103914