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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28157275_28159038_F

Intron Information:

Intron Rank:

139741

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28157275 - 28159038

Intron Length:

1764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATG

5'SS Class:

strong_major

3'SS Sequence:

TGAGAATACTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTTAA

U12 Branch Point Sequence:

ATCTGCTTAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

77.9

36.7

Major BPS

67.1

0.42

1.1

57.7

41.3

Major PPT

52.4

0.06

48.4

43.8

Minor 5ss

36.4

-1.5

3.1

48.5

47.2

Minor BPS

59.5

0.38

2.1

77.84

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025141

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044188

28156138 - 28159340

3203