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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28190530_28198846_R

Intron Information:

Intron Rank:

137099

Intron Class:

major

Intron Phase:

Intron Coordinates:

28190530 - 28198846

Intron Length:

8317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

TGATGAGTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.5

32.8

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

82.6

0.73

0.9

80.2

37.3

Minor 5ss

26.6

-2.7

31.8

42.6

Minor BPS

45.6

-0.2

2.5

70.9

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021256

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048081

28189285 - 28199564

10280