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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28286820_28302378_F

Intron Information:

Intron Rank:

135951

Intron Class:

major

Intron Phase:

Intron Coordinates:

28286820 - 28302378

Intron Length:

15559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TCTTCCCTAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

90.3

0.91

0.6

88.5

21.1

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

61.6

0.34

75.12

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041571

28286296 - 28302937

16642