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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28395430_28407911_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

28395430 - 28407911

Intron Length:

12482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGCG

5'SS Class:

major

3'SS Sequence:

TGTTTGTTCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TCACATAGAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

41.5

Major BPS

73.1

0.57

71.9

31.3

Major PPT

78.4

0.64

0.8

77.1

37.1

Minor 5ss

33.7

-1.9

3.8

47.1

48.5

Minor BPS

42.8

-0.4

1.7

57.27

39.1

Associated Gene:

Gene:

SMARCA2

Ensembl Gene ID:

ENSAPLG00000013873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048168

28395381 - 28518663

123283