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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28423486_28424301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28423486 - 28424301

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTCAAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATCTCAACA

Flanking Amino Acid:

QPPSAFNRQSGIGLHAMSGT

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

68.2

0.41

41.4

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

69.4

0.61

1.5

80.33

35.1

Associated Gene:

Gene:

SMARCA2

Ensembl Gene ID:

ENSAPLG00000013873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047703

28400474 - 28567886

167413

ENSAPLT00000033799

28400474 - 28556203

155730

ENSAPLT00000029625

28400474 - 28518663

118190

ENSAPLT00000014555

28400474 - 28557930

157457

ENSAPLT00000048168

28395381 - 28518663

123283