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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28428084_28433124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28428084 - 28433124

Intron Length:

5041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAAGTG

5'SS Class:

strong_major

3'SS Sequence:

TGTATTCACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

TTTTCCTGATGT

Flanking Amino Acid:

PVEILQEREYRLQARIAHRI

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

72.3

37.6

Major BPS

82.3

0.8

83.6

25.8

Major PPT

68.4

0.42

0.9

39.4

Minor 5ss

33.4

-1.9

3.6

46.6

48.7

Minor BPS

60.5

0.41

84.91

41.5

Associated Gene:

Gene:

SMARCA2

Ensembl Gene ID:

ENSAPLG00000013873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047703

28400474 - 28567886

167413

ENSAPLT00000033799

28400474 - 28556203

155730

ENSAPLT00000029625

28400474 - 28518663

118190

ENSAPLT00000014555

28400474 - 28557930

157457

ENSAPLT00000048168

28395381 - 28518663

123283