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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28443909_28445518_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28443909 - 28445518

Intron Length:

1610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTGAATTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTCGTTTGAATT

Flanking Amino Acid:

MASGLGPDGEPIDESSQMSD

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

74.6

0.61

1.4

34.5

Major PPT

0.52

0.9

70.5

39.9

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

55.6

0.26

1.5

71.39

40.7

Associated Gene:

Gene:

SMARCA2

Ensembl Gene ID:

ENSAPLG00000013873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029625

28400474 - 28518663

118190

ENSAPLT00000014555

28400474 - 28557930

157457

ENSAPLT00000048168

28395381 - 28518663

123283

ENSAPLT00000047703

28400474 - 28567886

167413

ENSAPLT00000033799

28400474 - 28556203

155730