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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28459266_28461785_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28459266 - 28461785

Intron Length:

2520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAAAA

5'SS Class:

major

3'SS Sequence:

TTTATCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

CATCACTTGATT

Flanking Amino Acid:

LTDGSEKDKKGKGGAKTLMN

Intron Amino Acid Position:

994

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

70.4

35.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.5

0.66

0.8

73.4

31.5

Minor 5ss

31.1

-2.2

3.2

39.8

45.8

Minor BPS

57.1

0.31

1.5

70.52

40.4

Associated Gene:

Gene:

SMARCA2

Ensembl Gene ID:

ENSAPLG00000013873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047703

28400474 - 28567886

167413

ENSAPLT00000033799

28400474 - 28556203

155730

ENSAPLT00000029625

28400474 - 28518663

118190

ENSAPLT00000014555

28400474 - 28557930

157457

ENSAPLT00000048168

28395381 - 28518663

123283