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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28461873_28462771_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28461873 - 28462771

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

TTTAACTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

ATGTTTTTAACT

Flanking Amino Acid:

NHPYMFQHIEESFAEHLGYS

Intron Amino Acid Position:

1023

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.99

0.8

81.6

33.2

Major BPS

87.3

0.93

0.8

36.5

Major PPT

80.6

0.69

0.9

74.1

36.1

Minor 5ss

41.6

-0.9

3.1

55.7

48.5

Minor BPS

77.7

0.95

1.1

85.51

34.9

Associated Gene:

Gene:

SMARCA2

Ensembl Gene ID:

ENSAPLG00000013873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047703

28400474 - 28567886

167413

ENSAPLT00000033799

28400474 - 28556203

155730

ENSAPLT00000029625

28400474 - 28518663

118190

ENSAPLT00000014555

28400474 - 28557930

157457

ENSAPLT00000048168

28395381 - 28518663

123283