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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28462819_28466075_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28462819 - 28466075

Intron Length:

3257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAACTCTC

5'SS Class:

major

3'SS Sequence:

TTCTCTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAC

U12 Branch Point Sequence:

TTCTCTTTAACA

Flanking Amino Acid:

HLGYSNGVINGAELYRASGK

Intron Amino Acid Position:

1038

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

67.1

44.6

Major BPS

66.4

0.41

37.6

Major PPT

83.5

0.75

0.8

80.5

30.1

Minor 5ss

43.9

-0.7

2.9

53.9

43.3

Minor BPS

85.2

1.1

86.93

31.8

Associated Gene:

Gene:

SMARCA2

Ensembl Gene ID:

ENSAPLG00000013873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029625

28400474 - 28518663

118190

ENSAPLT00000014555

28400474 - 28557930

157457

ENSAPLT00000048168

28395381 - 28518663

123283

ENSAPLT00000047703

28400474 - 28567886

167413

ENSAPLT00000033799

28400474 - 28556203

155730