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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28471571_28479635_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28471571 - 28479635

Intron Length:

8065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAACGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGTGACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TCTTTCCTAATG

Flanking Amino Acid:

AILEHEEENEEEDEVPDDET

Intron Amino Acid Position:

1225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

68.8

42.1

Major BPS

81.9

0.79

0.9

80.1

Major PPT

65.2

0.34

1.1

58.3

46.3

Minor 5ss

-1.9

3.3

48.4

47.1

Minor BPS

61.4

0.22

1.7

67.26

Associated Gene:

Gene:

SMARCA2

Ensembl Gene ID:

ENSAPLG00000013873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014555

28400474 - 28557930

157457

ENSAPLT00000048168

28395381 - 28518663

123283

ENSAPLT00000047703

28400474 - 28567886

167413

ENSAPLT00000033799

28400474 - 28556203

155730

ENSAPLT00000029625

28400474 - 28518663

118190