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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28517115_28517737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28517115 - 28517737

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTACCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGTCTCTTACCT

Flanking Amino Acid:

DDSDEDQDENDQSEASGSDD

Intron Amino Acid Position:

1558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

0.56

0.8

66.8

34.5

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

0.58

1.6

81.89

39.4

Associated Gene:

Gene:

SMARCA2

Ensembl Gene ID:

ENSAPLG00000013873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029625

28400474 - 28518663

118190

ENSAPLT00000048168

28395381 - 28518663

123283