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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28517115_28555972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28517115 - 28555972

Intron Length:

38858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTACCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCTTTCTACCT

Flanking Amino Acid:

DDSDEDQDENPVMA*

Intron Amino Acid Position:

1558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.2

0.77

0.7

78.4

29.1

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

48.2

-0

1.9

68.31

Associated Gene:

Gene:

SMARCA2

Ensembl Gene ID:

ENSAPLG00000013873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033799

28400474 - 28556203

155730