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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28649520_28650457_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28649520 - 28650457

Intron Length:

938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TGGTATTTAAAC

Flanking Amino Acid:

CSDGSDESACVKKTCAESDF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

86.1

0.81

0.8

81.1

30.9

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

57.6

0.22

1.6

65.44

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020545

28646025 - 28659844

13820

ENSAPLT00000016235

28649188 - 28659844

10657