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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28653579_28653657_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28653579 - 28653657

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCATTATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTCATTATCA

Flanking Amino Acid:

DGTDEANCNNVIQCSGPGKF

Intron Amino Acid Position:

300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

79.2

0.66

0.9

78.4

33.6

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

63.4

0.42

1.9

76.51

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016235

28649188 - 28659844

10657

ENSAPLT00000020545

28646025 - 28659844

13820