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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28654549_28654954_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28654549 - 28654954

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

AACTCTTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

AATCTTTTAACT

Flanking Amino Acid:

DLATGVCKAVGKEPCLIFTN

Intron Amino Acid Position:

423

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

87.1

Major BPS

89.7

0.98

0.7

89.9

Major PPT

74.7

0.56

0.9

68.4

36.5

Minor 5ss

38.9

-1.3

2.8

43.1

43.9

Minor BPS

71.8

0.76

1.1

80.75

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038714

28650458 - 28660482

10025

ENSAPLT00000020545

28646025 - 28659844

13820

ENSAPLT00000020288

28650458 - 28658985

8528

ENSAPLT00000016235

28649188 - 28659844

10657