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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28655127_28655442_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28655127 - 28655442

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

AAGCAAGTAACT

Flanking Amino Acid:

WADFSQKAIFSASIDTRDKV

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

89.2

0.88

0.7

81.2

36.5

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

42.2

-0.5

2.3

59.73

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038714

28650458 - 28660482

10025

ENSAPLT00000020545

28646025 - 28659844

13820

ENSAPLT00000020288

28650458 - 28658985

8528

ENSAPLT00000016235

28649188 - 28659844

10657