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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28655668_28655833_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28655668 - 28655833

Intron Length:

166

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAA

U12 Branch Point Sequence:

TTTTGCTTCACA

Flanking Amino Acid:

PASIAVDPLSGFMYWSDWGE

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

65.8

0.39

73.3

31.3

Major PPT

85.2

0.79

0.8

32.1

Minor 5ss

39.7

-1.2

3.1

51.1

45.2

Minor BPS

65.3

0.48

2.2

83.03

38.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016235

28649188 - 28659844

10657

ENSAPLT00000038714

28650458 - 28660482

10025

ENSAPLT00000020545

28646025 - 28659844

13820

ENSAPLT00000020288

28650458 - 28658985

8528