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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28658902_28659808_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28658902 - 28659808

Intron Length:

907

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTGTCATTATCT

Flanking Amino Acid:

SGSVGHTYPAISVVSTDDDM

Intron Amino Acid Position:

851

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

69.2

43.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

88.9

0.88

0.7

83.7

30.9

Minor 5ss

39.2

-1.2

2.9

49.5

46.5

Minor BPS

65.5

0.57

1.9

85.26

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038714

28650458 - 28660482

10025

ENSAPLT00000020545

28646025 - 28659844

13820

ENSAPLT00000016235

28649188 - 28659844

10657