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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28723139_28725209_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28723139 - 28725209

Intron Length:

2071

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTATGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTGTCTTAATTT

Flanking Amino Acid:

DEKMRESGKEGCFGRTLLER

Intron Amino Acid Position:

567

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

81.9

0.72

0.9

75.7

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

48.8

-0

1.9

66.59

45.3

Associated Gene:

Gene:

PUM3

Ensembl Gene ID:

ENSAPLG00000002920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003010

28719679 - 28745533

25855