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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28725298_28726886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28725298 - 28726886

Intron Length:

1589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCCTTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAC

U12 Branch Point Sequence:

TATCACTGAATA

Flanking Amino Acid:

ELVPGGHDGQLHIAEHPAGH

Intron Amino Acid Position:

538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

73.8

32.7

Major BPS

78.3

0.7

32.1

Major PPT

67.2

0.39

66.4

27.2

Minor 5ss

36.1

-1.6

3.2

46.7

48.6

Minor BPS

0.22

1.6

68.65

36.9

Associated Gene:

Gene:

PUM3

Ensembl Gene ID:

ENSAPLG00000002920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003010

28719679 - 28745533

25855