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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28734514_28736622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28734514 - 28736622

Intron Length:

2109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATC

5'SS Class:

major

3'SS Sequence:

TTTTCTTCATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TTTTCTTTCACC

Flanking Amino Acid:

FTYALPKQRSEMIEAIREAV

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

78.6

35.6

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

85.7

0.8

86.3

26.4

Minor 5ss

43.2

-0.7

2.9

64.8

39.3

Minor BPS

75.5

0.79

1.6

85.93

32.4

Associated Gene:

Gene:

PUM3

Ensembl Gene ID:

ENSAPLG00000002920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003010

28719679 - 28745533

25855