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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28737335_28739235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28737335 - 28739235

Intron Length:

1901

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTACA

5'SS Class:

major

3'SS Sequence:

ACATTCGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTAAA

U12 Branch Point Sequence:

AATGATTAAACC

Flanking Amino Acid:

LYGNTFQVYKTPVVPTLDKV

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

76.7

33.9

Major BPS

64.8

0.37

1.2

67.9

36.3

Major PPT

73.6

0.53

69.7

40.7

Minor 5ss

36.1

-1.6

2.6

43.5

43.6

Minor BPS

47.6

-0.2

1.9

58.56

40.4

Associated Gene:

Gene:

PUM3

Ensembl Gene ID:

ENSAPLG00000002920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003010

28719679 - 28745533

25855