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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28740225_28740447_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28740225 - 28740447

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

GCTAGCTGAATG

Flanking Amino Acid:

QRQETFEELKDSLVELSKSK

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

82.4

30.8

Major BPS

0.3

62.3

30.4

Major PPT

79.9

0.67

0.7

72.8

32.1

Minor 5ss

58.1

0.27

2.3

39.6

Minor BPS

46.1

-0.4

49.63

44.3

Associated Gene:

Gene:

PUM3

Ensembl Gene ID:

ENSAPLG00000002920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003010

28719679 - 28745533

25855