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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28740542_28741362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28740542 - 28741362

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGGAAA

5'SS Class:

major

3'SS Sequence:

ATCTGTCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

GGATAATGAAAT

Flanking Amino Acid:

QKLLKGKIKNLAFAHDSTRV

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

76.9

33.2

Major BPS

67.7

0.44

38.9

Major PPT

76.9

0.6

0.9

70.1

35.9

Minor 5ss

-1.8

3.2

44.1

43.8

Minor BPS

44.2

-0.3

1.9

60.05

41.6

Associated Gene:

Gene:

PUM3

Ensembl Gene ID:

ENSAPLG00000002920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003010

28719679 - 28745533

25855