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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28742300_28743953_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28742300 - 28743953

Intron Length:

1654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

TCTTGTTAACTA

Flanking Amino Acid:

KRKLQDGEEGGSDSKKPKWN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

90.6

0.91

0.7

28.1

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

44.1

-0.4

2.2

57.68

43.3

Associated Gene:

Gene:

PUM3

Ensembl Gene ID:

ENSAPLG00000002920

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003010

28719679 - 28745533

25855