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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28768205_28769142_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

28768205 - 28769142

Intron Length:

938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTTTTTC

5'SS Class:

weak_major

3'SS Sequence:

TTTTTTTCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCAACAC

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

EAWLDQMILELLVRSNNLSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.3

67.7

38.4

Major BPS

49.4

-0

1.1

57.3

37.7

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

46.3

-0.4

2.5

62.1

42.5

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039307

28763770 - 28769301

5532