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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28833498_28834356_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28833498 - 28834356

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

GCTACTTTTACG

Flanking Amino Acid:

NAVSPGNMDKDEGSEVESEI

Intron Amino Acid Position:

671

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.8

90.9

28.7

Major BPS

74.2

0.6

39.4

Major PPT

84.3

0.77

0.9

80.6

Minor 5ss

45.3

-0.5

2.9

45.2

Minor BPS

52.2

-0

1.8

56.79

44.5

Associated Gene:

Gene:

RFX3

Ensembl Gene ID:

ENSAPLG00000011096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010315

28833259 - 28894070

60812

ENSAPLT00000039282

28833259 - 28894070

60812

ENSAPLT00000011568

28833259 - 28893673

60415