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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28837809_28839887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28837809 - 28839887

Intron Length:

2079

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTATTT

5'SS Class:

major

3'SS Sequence:

TATTTTTGAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAC

U12 Branch Point Sequence:

TATTTTTGAATA

Flanking Amino Acid:

RQFLLKWSFYSSMVIRDLTL

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

74.4

36.8

Major BPS

69.1

0.48

32.1

Major PPT

72.1

0.5

70.2

39.9

Minor 5ss

42.6

-0.8

3.4

64.9

46.4

Minor BPS

65.4

0.48

1.3

72.78

32.9

Associated Gene:

Gene:

RFX3

Ensembl Gene ID:

ENSAPLG00000011096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011568

28833259 - 28893673

60415

ENSAPLT00000010315

28833259 - 28894070

60812

ENSAPLT00000039282

28833259 - 28894070

60812