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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28846881_28848977_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28846881 - 28848977

Intron Length:

2097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

CTTTAATGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TATTCTTTAATG

Flanking Amino Acid:

LIPDVLRPIPSALTQAIRNF

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

70.5

36.3

Major BPS

100

1.24

0.5

100

Major PPT

75.2

0.57

40.7

Minor 5ss

41.4

-1

2.8

50.8

41.1

Minor BPS

78.7

0.76

1.2

76.34

35.4

Associated Gene:

Gene:

RFX3

Ensembl Gene ID:

ENSAPLG00000011096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039282

28833259 - 28894070

60812

ENSAPLT00000011568

28833259 - 28893673

60415

ENSAPLT00000010315

28833259 - 28894070

60812