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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28851950_28859029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28851950 - 28859029

Intron Length:

7080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTGT

5'SS Class:

strong_major

3'SS Sequence:

GATACTTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TTAATTTCAAAC

Flanking Amino Acid:

MRQQPMQQKQRYKPMQKVDG

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.8

39.1

Major BPS

0.79

0.8

83.7

25.7

Major PPT

72.4

0.5

0.9

66.1

40.3

Minor 5ss

37.8

-1.4

3.5

55.9

48.3

Minor BPS

49.3

-0

1.6

61.3

37.6

Associated Gene:

Gene:

RFX3

Ensembl Gene ID:

ENSAPLG00000011096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010315

28833259 - 28894070

60812

ENSAPLT00000039282

28833259 - 28894070

60812

ENSAPLT00000011568

28833259 - 28893673

60415