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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28859150_28859735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28859150 - 28859735

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTTGTGTT

5'SS Class:

major

3'SS Sequence:

TTCTCTCATAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TCTCTCATAAAG

Flanking Amino Acid:

MGLRTRRLGTRGNSKYHYYG

Intron Amino Acid Position:

244

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

79.1

34.5

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

70.2

0.45

1.1

71.5

32.4

Minor 5ss

41.1

-1

3.1

58.6

Minor BPS

49.7

-0.1

1.8

58.82

42.5

Associated Gene:

Gene:

RFX3

Ensembl Gene ID:

ENSAPLG00000011096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011568

28833259 - 28893673

60415

ENSAPLT00000010315

28833259 - 28894070

60812

ENSAPLT00000039282

28833259 - 28894070

60812