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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_28859918_28864002_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28859918 - 28864002

Intron Length:

4085

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ATATGTCATATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TGTTTCCCACCT

Flanking Amino Acid:

THRSSLLNSHLQWLLDNYET

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.8

34.4

Major BPS

79.2

0.73

75.3

39.4

Major PPT

65.6

0.35

59.2

41.4

Minor 5ss

44.3

-0.6

2.9

62.8

41.9

Minor BPS

47.7

-0

2.1

73.49

43.1

Associated Gene:

Gene:

RFX3

Ensembl Gene ID:

ENSAPLG00000011096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011568

28833259 - 28893673

60415

ENSAPLT00000010315

28833259 - 28894070

60812