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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29300435_29320497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29300435 - 29320497

Intron Length:

20063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TATTTTTTAGCA

Flanking Amino Acid:

LPLIISSMITGVAALDSSVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

0.88

0.7

84.2

30.7

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

67.3

0.54

1.5

75.95

35.3

Associated Gene:

Gene:

SLC1A1

Ensembl Gene ID:

ENSAPLG00000015022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040481

29282668 - 29344040

61373

ENSAPLT00000015672

29295986 - 29342586

46601