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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29324088_29325436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29324088 - 29325436

Intron Length:

1349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TAAACTTTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAC

Flanking Amino Acid:

ENLVQACFQQYKTKREKVEA

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.7

83.9

30.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

77.1

0.61

0.9

73.6

41.1

Minor 5ss

38.4

-1.3

2.9

48.7

47.5

Minor BPS

76.4

0.81

1.2

82.98

29.8

Associated Gene:

Gene:

SLC1A1

Ensembl Gene ID:

ENSAPLG00000015022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040481

29282668 - 29344040

61373

ENSAPLT00000015672

29295986 - 29342586

46601