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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29327025_29328802_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29327025 - 29328802

Intron Length:

1778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCCTTTTTAATT

Flanking Amino Acid:

ATMRIVQIIMWYMPIGIVFL

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

73.3

37.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.9

0.78

0.8

77.7

36.7

Minor 5ss

34.6

-1.7

2.8

39.6

39.8

Minor BPS

71.7

0.76

1.2

78.3

39.3

Associated Gene:

Gene:

SLC1A1

Ensembl Gene ID:

ENSAPLG00000015022

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040481

29282668 - 29344040

61373

ENSAPLT00000015672

29295986 - 29342586

46601