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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29451168_29454174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29451168 - 29454174

Intron Length:

3007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

TTCTACTCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

GTAACTTTAAAA

Flanking Amino Acid:

RAREEDPGLRDFEASFIRLI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

79.5

0.66

0.8

77.3

31.1

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

62.3

0.38

1.4

67.46

38.2

Associated Gene:

Gene:

RCL1

Ensembl Gene ID:

ENSAPLG00000006031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047198

29451014 - 29489307

38294

ENSAPLT00000018626

29451014 - 29481929

30916

ENSAPLT00000006275

29451014 - 29488687

37674