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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29454247_29455038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29454247 - 29455038

Intron Length:

792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCT

5'SS Class:

strong_major

3'SS Sequence:

GCCTCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TCTAATTTGATT

Flanking Amino Acid:

NGSRIEINQTGTTLYYQPGL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

74.2

36.1

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

70.4

0.46

0.8

61.2

35.1

Minor 5ss

29.2

-2.4

3.1

45.5

Minor BPS

55.9

0.27

1.5

72.21

39.2

Associated Gene:

Gene:

RCL1

Ensembl Gene ID:

ENSAPLG00000006031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018626

29451014 - 29481929

30916

ENSAPLT00000006275

29451014 - 29488687

37674

ENSAPLT00000047198

29451014 - 29489307

38294