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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29464531_29470467_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29464531 - 29470467

Intron Length:

5937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTGTTTTCAAAT

Flanking Amino Acid:

TDHMKGVSSGKSPGFGMCLI

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.1

26.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

86.3

0.82

0.7

80.4

Minor 5ss

36.6

-1.5

2.9

46.1

36.1

Minor BPS

59.3

0.37

1.6

76.82

39.9

Associated Gene:

Gene:

RCL1

Ensembl Gene ID:

ENSAPLG00000006031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006275

29451014 - 29488687

37674

ENSAPLT00000047198

29451014 - 29489307

38294

ENSAPLT00000018626

29451014 - 29481929

30916