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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29481694_29488609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29481694 - 29488609

Intron Length:

6916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGGGGAAA

5'SS Class:

major

3'SS Sequence:

TATCTTTCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTTAT

U12 Branch Point Sequence:

TTATCTTTCACC

Flanking Amino Acid:

ETKSPEEEHKAPPEDYNQVA

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

61.8

40.3

Major BPS

71.3

0.53

61.3

Major PPT

77.1

0.61

0.9

70.9

39.4

Minor 5ss

24.3

-3

3.1

21.1

37.8

Minor BPS

69.4

0.59

1.7

78.94

36.6

Associated Gene:

Gene:

RCL1

Ensembl Gene ID:

ENSAPLG00000006031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006275

29451014 - 29488687

37674