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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29481716_29489243_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

29481716 - 29489243

Intron Length:

7528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGTGTTGG

5'SS Class:

major

3'SS Sequence:

ATTGTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGATTTTAAATT

Flanking Amino Acid:

EHKGGEKVLMTTVSPNTTCY

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.3

58.4

43.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.4

0.82

0.8

81.1

35.9

Minor 5ss

41.6

-0.9

2.7

47.5

42.1

Minor BPS

57.9

0.32

1.6

72.55

39.1

Associated Gene:

Gene:

RCL1

Ensembl Gene ID:

ENSAPLG00000006031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047198

29451014 - 29489307

38294