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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29532151_29537867_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

29532151 - 29537867

Intron Length:

5717

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGGGTCTT

5'SS Class:

major

3'SS Sequence:

GTTTCTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

70.5

41.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

83.7

0.76

0.8

77.9

35.1

Minor 5ss

33.5

-1.9

3.4

43.6

Minor BPS

0.52

1.3

69.97

38.4

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030622

29531637 - 29584663

53027