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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_29538013_29539067_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

29538013 - 29539067

Intron Length:

1055

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTGCAACGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TTTTTTGCAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

83.3

28.2

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

62.7

0.29

59.5

41.6

Minor 5ss

36.1

-1.6

2.7

45.4

42.7

Minor BPS

49.5

-0.1

2.2

66.64

41.7

Associated Gene:

Gene:

JAK2

Ensembl Gene ID:

ENSAPLG00000004748

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005025

29537868 - 29584663

46796